BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023D10SP1|AL428052
(992 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig628 1693 0.0
>3x_Contig628
Length = 1864
Score = 1693 bits (846), Expect = 0.0
Identities = 882/900 (98%), Gaps = 2/900 (0%)
Strand = Plus / Minus
Query: 77 atattactttccaaatatttgatgtatttttgcttgahagatttattatcagcmggaaga 136
||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||
Sbjct: 1859 atattactttccaaatatttgatgtatttttgcttcaaagatttattatcagcaggaaga 1800
Query: 137 gcccggagtgctctttcaaacaaggggaacgtacattcgggaccmaaagtcctttcagtc 196
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1799 gcccggagtgctctttcaaacaaggggaacgtacattcgggaccaaaagtcctttcagtc 1740
Query: 197 cagtcaatataggctccccagamatattcgtatcttaaacatggaatcaaacatctctca 256
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1739 cagtcaatataggctccccagaaatattcgtatcttaaacatggaatcaaacatctctca 1680
Query: 257 aacgtcgattttattaattctgtactgaactcagtgttgttgattaagaaagatagataa 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1679 aacgtcgattttattaattctgtactgaactcagtgttgttgattaagaaagatagataa 1620
Query: 317 gcmtcccaattctgaatctcattctcgggaagctcagggatattgamamatggctgtttt 376
|| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 1619 gcatcccaattctgaatctcattctcgggaagctcagggatattgaaaaatggctgtttt 1560
Query: 377 atttgtgattcatatgtccatattttgttcaccttctcctggttagamatmaatgtggta 436
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 1559 atttgtgattcatatgtccatattttgttcaccttctcctggttagaaataaatgtggta 1500
Query: 437 tccaaatggatgcttgattccctattagcmaactctgggtgatattccaagaattcctta 496
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1499 tccaaatggatgcttgattccctattagcaaactctgggtgatattccaagaattcctta 1440
Query: 497 aagctggtgtagtatcttgcatattgatgccaaggttgctgcmtgacttgtttgtacacc 556
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 1439 aagctggtgtagtatcttgcatattgatgcaaaggttgctgcatgacttgtttgtacacc 1380
Query: 557 tcamatacgttttcccagttctgtagtcttgtttcatatgccatgtgcttatcccaaatm 616
||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1379 tcaaatacgttttcccagttctgtagtcttgtttcatatgcaatgtgcttatcccaaata 1320
Query: 617 tcgtgcgagaggaaatgagatcccacgagggattcgcatttcctgaactggtttcgtatc 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1319 tcgtgcgagaggaaatgagatcccacgagggattcgcatttcctgaactggtttcgtatc 1260
Query: 677 agttcactatcattctgattatgtgttagataaacgttcaacatatcaatccaaagatct 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 agttcactatcattctgattatgtgttagataaacgttcaacatatcaatccaaagatct 1200
Query: 737 atcgacgtagggaacgaatgtaaagatgcctttaaagtagaaatagacccttctaatcca 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 atcgacgtagggaacgaatgtaaagatgcctttaaagtagaaatagacccttctaatcca 1140
Query: 797 tctagctgatatttcaccgcaacgtatcgtttccagtaaccaaaaaataacggatacctt 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1139 tctagctgatatttcaccgcaacgtatcgtttccagtaaccaaaaaataacggatacctt 1080
Query: 857 cccaataactcatcaaaaactttatatatattgctcttcacatgttcattgggattattg 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 cccaataactcatcaaaaactttatatatattgctcttcacatgttcattgggattattg 1020
Query: 917 tatttctgtaccaatgcttctgtacc-accaccagtttgtcgatagtag-tatatcgttc 974
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 1019 tatttctgtaccaatgcttctgtaccaaccaccagtttgtcgatagtagttatatcgttc 960
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6587
Number of Sequences: 1807
Number of extensions: 6587
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 992
length of database: 10,358,551
effective HSP length: 16
effective length of query: 976
effective length of database: 10,329,639
effective search space: 10081727664
effective search space used: 10081727664
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)